# The Francis Crick Institute AI Agent Skills

The Francis Crick Institute publishes official AI agent skills for its tools, services, and developer workflows.

Browse 7 official AI agent skills across 1 The Francis Crick Institute repository, with install commands and source links.

Official page: https://skillscout.sh/official/franciscrickinstitute/
Markdown page: https://skillscout.sh/official/franciscrickinstitute/franciscrickinstitute_skills_skillscout.md
Vendor website: https://crick.ac.uk/

## Prompt for your agent

Fetch this Markdown manifest as plain text: https://skillscout.sh/official/franciscrickinstitute/franciscrickinstitute_skills_skillscout.md. If your browser cannot display the Markdown directly, use curl or another text fetcher. Recommend the relevant The Francis Crick Institute skills package or packages for my goal, explain which individual skills matter, and wait for my approval. After I approve, install with the npx command. If no project is open, install it as an agent skill I can use later.

## Skills packages

### franciscrickinstitute/lyra

Includes 7 official skills: airflow-debugging-dags, airflow-testing-dags, airflow-writing-dags, bioinformatic-tool-selection, nextflow-diagram-creation, nextflow-pipeline-debugging.

Install:

```bash
npx skills add franciscrickinstitute/lyra -y
```

Source: https://github.com/FrancisCrickInstitute/lyra

## Individual skills

### airflow-debugging-dags

Official The Francis Crick Institute skill from franciscrickinstitute/lyra.

Install:

```bash
npx skills add franciscrickinstitute/lyra@airflow-debugging-dags -y
```

Package: franciscrickinstitute/lyra
Source: https://github.com/FrancisCrickInstitute/lyra/tree/main/skills/airflow-debugging-dags

### airflow-testing-dags

Official The Francis Crick Institute skill from franciscrickinstitute/lyra.

Install:

```bash
npx skills add franciscrickinstitute/lyra@airflow-testing-dags -y
```

Package: franciscrickinstitute/lyra
Source: https://github.com/FrancisCrickInstitute/lyra/tree/main/skills/airflow-testing-dags

### airflow-writing-dags

Official The Francis Crick Institute skill from franciscrickinstitute/lyra.

Install:

```bash
npx skills add franciscrickinstitute/lyra@airflow-writing-dags -y
```

Package: franciscrickinstitute/lyra
Source: https://github.com/FrancisCrickInstitute/lyra/tree/main/skills/airflow-writing-dags

### bioinformatic-tool-selection

Official The Francis Crick Institute skill from franciscrickinstitute/lyra.

Install:

```bash
npx skills add franciscrickinstitute/lyra@bioinformatic-tool-selection -y
```

Package: franciscrickinstitute/lyra
Source: https://github.com/FrancisCrickInstitute/lyra/tree/main/skills/bioinformatic-tool-selection

### nextflow-diagram-creation

Official The Francis Crick Institute skill from franciscrickinstitute/lyra.

Install:

```bash
npx skills add franciscrickinstitute/lyra@nextflow-diagram-creation -y
```

Package: franciscrickinstitute/lyra
Source: https://github.com/FrancisCrickInstitute/lyra/tree/main/skills/nextflow-diagram-creation

### nextflow-pipeline-debugging

Official The Francis Crick Institute skill from franciscrickinstitute/lyra.

Install:

```bash
npx skills add franciscrickinstitute/lyra@nextflow-pipeline-debugging -y
```

Package: franciscrickinstitute/lyra
Source: https://github.com/FrancisCrickInstitute/lyra/tree/main/skills/nextflow-pipeline-debugging

### nf-core-modules-subworkflows

Official The Francis Crick Institute skill from franciscrickinstitute/lyra.

Install:

```bash
npx skills add franciscrickinstitute/lyra@nf-core-modules-subworkflows -y
```

Package: franciscrickinstitute/lyra
Source: https://github.com/FrancisCrickInstitute/lyra/tree/main/skills/nf-core-modules-subworkflows

## franciscrickinstitute/lyra package overview

Includes 7 official skills: airflow-debugging-dags, airflow-testing-dags, airflow-writing-dags, bioinformatic-tool-selection, nextflow-diagram-creation, nextflow-pipeline-debugging.

### Top skills in this package

- airflow-debugging-dags: Official The Francis Crick Institute skill from franciscrickinstitute/lyra.
- airflow-testing-dags: Official The Francis Crick Institute skill from franciscrickinstitute/lyra.
- airflow-writing-dags: Official The Francis Crick Institute skill from franciscrickinstitute/lyra.
- bioinformatic-tool-selection: Official The Francis Crick Institute skill from franciscrickinstitute/lyra.
- nextflow-diagram-creation: Official The Francis Crick Institute skill from franciscrickinstitute/lyra.
- nextflow-pipeline-debugging: Official The Francis Crick Institute skill from franciscrickinstitute/lyra.
- nf-core-modules-subworkflows: Official The Francis Crick Institute skill from franciscrickinstitute/lyra.

### Install

Install the full package:

```bash
npx skills add franciscrickinstitute/lyra -y
```

Install a specific skill:

```bash
npx skills add franciscrickinstitute/lyra@airflow-debugging-dags -y
```

Use the package when you want your agent to choose the relevant skill from this official repository.

Source: https://github.com/franciscrickinstitute/lyra#readme